Sem:Capstone CCX

This course provides a forum for Community Engagement and Social Change concentration students to develop research projects that synthesize their prior coursework and practical experiences. In a typical capstone project, student teams complete a collaborative project focused on imagining concrete ways out of current crises by designing and proposing innovative approaches to dismantling structures of inequality or catalyzing structures of equity. Restrictions: Juniors and seniors only. Enrollment limited to 15. Instructor permission required.

Chapbook: Design

Offered as BKX 203 and PYX 203. This course focuses on various professional practice aspects of publishing, including manuscript selection, book design and production, and product marketing and distribution, through Nine Syllables Press, in partnership with the Boutelle-Day Poetry Center. Students learn about the publishing industry and contemporary US poetry landscape. Students have the opportunity to learn about and practice designing professional chapbook interiors and covers, producing and marketing chapbooks for a selected manuscript from Nine Syllables Press. Cannot be taken S/U.

Sem: T-Environ-Coral Reef Ecol

Coral reefs occupy a small portion of Earth’s surface, but their importance to the marine ecosystem is great. This course considers the geologic importance and ecological interactions of coral reefs. It focuses on the status of coral reefs worldwide, considering effects of environmental and anthropogenic disturbances (e.g., major storms, eutrophication, acidification, overfishing). Methods for reef conservation are examined. Restrictions: Juniors and seniors only. Enrollment limited to 12. Instructor permission required.

Colq:Quantitativ Ecology

An advanced course covering ecological modeling and data analysis. Students explore the principles of mathematical modeling to describe population dynamics and species interactions. Students also learn modern analytical approaches in the study of ecological communities and ecological experiments. In addition to theoretical quantitative foundations, students acquire the analytical skills to implement mathematical and statistical models using the R computing language. Prerequisites: BIO 130/BIO 131, BIO 266/BIO 267, BIO 268/BIO 269 or BIO 364/BIO 365 and SDS 201 or SDS 220, or equivalent.

Microbial Diversity Lab

This research-based lab allows students to explore the eukaryotic microbiomes associated with various environments on campus, including the greenhouse and marine aquaria. Students in the course master the basics of light microscopy, PCR and analyses of high-throughput sequencing data. Students also use the scanning electron microscope to survey their communities. The work in the course culminates in a poster presentation on the discoveries of the semester. Corequisite: BIO 370. Enrollment limited to 18.

Microbial Diversity

This course focuses on the origin and diversification of microorganisms, with emphasis on eukaryotic lineages. The first weeks of lecture cover the origin of life on Earth and the diversification of bacteria and archaea. From there, students focus on the diversification of eukaryotes, examining the many innovations that mark some of the major clades of eukaryotes. Evaluation is based on a combination of class participation, short writings and an independent research paper. Concurrent registration in BIO 371 is strongly recommended but not required.

Biogeography

A study of major patterns of distribution of life and of the environmental and geological factors underlying these patterns. The role of phenomena such as sea-level fluctuations, plate tectonics, oceanic currents, biological invasions and climate change in determining past, present and future global patterns of biodiversity are considered. Fundamental differences between terrestrial and marine biogeography are highlighted. Prerequisite: a course in ecology, evolution, or organismal biology or equivalent. Enrollment limited to 20.

Bioinform & Compar Mol Bio Lab

This lab introduces the computational and quantitative tools underlying contemporary bioinformatics. Students explore the various approaches to phylogenetic reconstruction using molecular data, methods of data mining in genome databases, comparative genomics, structure-function modeling and the use of molecular data to reconstruct population and evolutionary history. Students are encouraged to explore datasets of particular interest to them. Corequisite: BIO 334 or equivalent. Enrollment limited to 20.
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